PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_448849g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 554aa    MW: 59612.7 Da    PI: 6.9897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_448849g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11410452754
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A+eY+k+L
  MA_448849g0010 410 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 452
                     79*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.58403452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-16406471IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.4E-9409452IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.4E-14409458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-16410466IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.42E-13410456No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MNLNGGVWGL EDATDLHCNN DENLNLPTFK AMLDAEEWFT SHSNTSNNDI TTASINNANS  60
HPDGPCFNID MKDFGCYSSL VNPNPEPPNM LLQHAMNSCS SSPASIFSLD PSQVQSFLAG  120
GSNHHHHHHV SPFPDVAGSS PFQELACEGL VSSNNASSNS SSNSYLYGGL PGGIFRQLSP  180
SFAGSSPRTN TVTPTPNLSS PHSQMGGSST PNLSPRMMPT SNLNLSDTGL FASSNHTTTT  240
TNNNNLSNLL GLSSLMSPRI PAPLNFSSPK MLRPLEICAP VGAQPTLFQK RAALRHTALS  300
RCTTTPCIEV LDEESPNGNS NSNVKGKSKL MLVGADNKEE EDVDESNDGS GVHYDSDDVG  360
ANNNSYKVDQ IGEDGLASAG GTGNADAVNN NINGGGDKGK KKGLPAKNLM AERRRRKKLN  420
DRLYMLRSVV PKISKMDRAS ILGDAIEYLK ELLQKINDLH NELESTSQGP VLPGTSNFHP  480
LTPTTPSLPC RVKEECPTSL PSPNAQPARM YFGQSKPKKE KLHLKRLKLC CYTLQAVILQ  540
YSLKSVHGCR ICIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1399417KKKGLPAKNLMAERRRRKK
2411418ERRRRKKL
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1163410.0BT116341.1 Picea glauca clone GQ03716_N08 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB2KZF31e-168B2KZF3_PICAB; Inducer of CBF expression 1 (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5571678
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.48e-55bHLH family protein